Links

Software Based on ImageJ

Bio7
Fiji Project
ImageJ2 (imagejdev.org)
"ImageJ for Microscopy" Bundle
µManager
ObjectJ
SalsaJ

Documentation

efg's Lab, Library and Book Store
Hypermedia Image Processing Ref.
Image File Formats
Image Processing Fundamentals
Java 1.6 API Specification
The Java Tutorial

Imaging Libraries

Acme GIF Encoder
Gnome TWAIN Library
Imagero Java I/O Library
The Java Imaging Utilities
JTwain TWAIN Library
JIMI Software Development Kit
LizardWorks TIFF Library
PixTools for Java
RasterMaster/Java

Image Analysis Software

CellProfiler (cell image analysis)
ICY (open source software for bio-imaging) [new]
idoimaging (medical imaging)
ImageSurfer (3D visualization and analysis)
Internet Analysis Tools Registry
MIPAV (3D imaging and visualization) [new]
NITRC (Neuroimaging Tools and Resources)

Science and Education

Teaching Image Processing
The Cell: An Image Library [new]

Java Programming

Cafe au Lait
java.net
Java on the Brain
Java Glossary
Java Lobby
java.sun.com
Java Tips Java World
Stack Overflow [new]

Benchmarks

"Plasma"
Sieve of Eratosthenes
SciMark 2.0
Find 3D Max plugins [new]