// "LSM_Batch_With_Colors" // This is a macro that uses LSM Reader to batch convert // LSM files, keeping the original channel colors. // Requires LSM Reader v3.2f or later. macro "lsm_batch_with_colors" { sourcedir=getDirectory("select source directory with lsm files"); destdir=getDirectory("select or create destination directory"); Dialog.create("LSM Batch color converter options"); Dialog.addChoice("Export format ", newArray("Tiff", "Jpeg")); Dialog.addCheckbox("Split Stacks ", false); Dialog.show(); type = Dialog.getChoice(); split_stacks = Dialog.getCheckbox(); list = getFileList(sourcedir); setBatchMode(true); for (i=0; i 0) { name=getTitle(); name = replace(name,".","_"); name = replace(name,":","_"); name = replace(name," ","_"); rename(name); if (split_stacks) { run("Image Sequence... ", "format="+type+" name="+name+" start=0 digits=4 save=["+destdir+name+"]"); } else { saveAs(type,destdir+name); } close(); } }